EnhancerDB
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  3. rs551856973[chr5:171566497]
Enhancers that have rs551856973[chr5:171566497]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs551856973[chr5:171566497]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171566492 171566502 NFATC3 JASPAR yes 67766638
chr5 171566494 171566501 NFATC2 JASPAR yes 67766639
chr5 171566495 171566510 FOXP1 JASPAR yes 67766640
chr5 171566496 171566511 FOXP1 JASPAR yes 67766641
chr5 171566496 171566517 IRF1 JASPAR yes 67766642
chr5 171566497 171566512 FOXP1 JASPAR yes 67766643
chr5 171566497 171566518 IRF1 JASPAR yes 67766644
Genes associated with rs551856973[chr5:171566497], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More