EnhancerDB
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  3. rs551890039[chr18:56660441]
Enhancers that have rs551890039[chr18:56660441]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56653868 56668695 enh4877
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Stomach Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Uterus Heart
Transcript factors that have rs551890039[chr18:56660441]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56660032 56660468 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21824468
chr18 56660037 56660633 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824469
chr18 56660380 56660920 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21824471
chr18 56660435 56660446 HOXA10 JASPAR yes 110998106
chr18 56660436 56660446 EMX1 JASPAR yes 110998107
chr18 56660436 56660446 EMX2 JASPAR yes 110998108
chr18 56660436 56660446 ESX1 JASPAR yes 110998109
chr18 56660436 56660446 EVX2 JASPAR yes 110998110
chr18 56660436 56660446 HOXA2 JASPAR yes 110998111
chr18 56660436 56660446 HOXB2 JASPAR yes 110998112
chr18 56660436 56660446 HOXB3 JASPAR yes 110998113
chr18 56660436 56660446 LHX6 JASPAR yes 110998114
chr18 56660436 56660446 MEOX1 JASPAR yes 110998115
chr18 56660436 56660446 MEOX2 JASPAR yes 110998116
chr18 56660436 56660446 MNX1 JASPAR yes 110998117
chr18 56660436 56660446 NOTO JASPAR yes 110998118
chr18 56660436 56660446 POU6F1 JASPAR yes 110998119
chr18 56660436 56660446 RAX JASPAR yes 110998120
chr18 56660437 56660445 LMX1A JASPAR yes 110998121
chr18 56660437 56660445 LMX1B JASPAR yes 110998122
chr18 56660437 56660445 NKX6-1 JASPAR yes 110998123
chr18 56660437 56660445 NKX6-2 JASPAR yes 110998124
chr18 56660437 56660445 PDX1 JASPAR yes 110998125
chr18 56660437 56660445 VAX1 JASPAR yes 110998126
chr18 56660437 56660445 VAX2 JASPAR yes 110998127
chr18 56660437 56660445 VSX1 JASPAR yes 110998128
chr18 56660440 56660850 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21824472
Genes associated with rs551890039[chr18:56660441], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More