EnhancerDB
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  3. rs551942679[chr11:12178799]
Enhancers that have rs551942679[chr11:12178799]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12175905 12217435 enh13777
Bone Marrow (K562) Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs551942679[chr11:12178799]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12178797 12178801 LFA1 TRANSFAC yes 37426459
chr11 12178798 12178808 ID4 JASPAR yes 37426460
chr11 12178798 12178808 TCF3 JASPAR yes 37426461
chr11 12178798 12178808 TCF4 JASPAR yes 37426462
chr11 12178799 12178808 SNAI2 JASPAR yes 37426463
Genes associated with rs551942679[chr11:12178799], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More