EnhancerDB
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  3. rs551961622[chr15:41198439]
Enhancers that have rs551961622[chr15:41198439]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41192765 41214015 enh3543
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs551961622[chr15:41198439]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41197608 41198486 TEF1 GTRD no Bone (Osteoblast) 21650958
chr15 41198087 41198683 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21650963
chr15 41198191 41198567 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650964
chr15 41198205 41198581 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21650965
chr15 41198213 41198878 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650966
chr15 41198237 41198593 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21650967
chr15 41198241 41198568 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650968
chr15 41198331 41198881 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650969
chr15 41198368 41198738 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650970
chr15 41198385 41198769 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650971
chr15 41198411 41198583 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21650972
chr15 41198426 41198802 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650973
chr15 41198430 41198444 PLAG1 JASPAR yes 22961589
chr15 41198430 41198445 TFAP2A JASPAR yes 22961590
chr15 41198430 41198445 TFAP2C JASPAR yes 22961591
chr15 41198432 41198445 TFAP2A JASPAR yes 22961592
chr15 41198432 41198445 TFAP2B JASPAR yes 22961593
chr15 41198432 41198445 TFAP2C JASPAR yes 22961594
chr15 41198432 41198447 TFAP2A JASPAR yes 22961595
chr15 41198432 41198447 TFAP2C JASPAR yes 22961596
chr15 41198438 41198453 HNF4A JASPAR yes 22961597
chr15 41198439 41198454 HNF4G JASPAR yes 22961598
Genes associated with rs551961622[chr15:41198439], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More