EnhancerDB
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  3. rs552017238[chr19:2968985]
Enhancers that have rs552017238[chr19:2968985]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2960165 2972415 enh17857
Cervix (HeLa-S3) Epithelial (MCF-7) Liver Lung Blood (OCI-LY7) Stomach Placenta Lung (PC-9) Pancreas Uterus Thymus Heart
Transcript factors that have rs552017238[chr19:2968985]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2968407 2969672 ZNF143 GTRD no Epithelial (MCF-7) 21838361
chr19 2968818 2969658 ZNF274 GTRD no Cervix (HeLa-S3) 21838362
chr19 2968832 2969390 ZNF274 GTRD no Cervix (HeLa-S3) 21838363
chr19 2968871 2969658 ZNF274 GTRD no Cervix (HeLa-S3) 21838364
chr19 2968912 2969667 ZNF274 GTRD no Cervix (HeLa-S3) 21838365
chr19 2968930 2969471 ZNF143 GTRD no Epithelial (MCF-7) 21838366
chr19 2968934 2969511 ZNF274 GTRD no Cervix (HeLa-S3) 21838367
chr19 2968955 2969696 ZNF274 GTRD no Cervix (HeLa-S3) 21838368
chr19 2968967 2968987 RREB1 JASPAR yes 112105194
chr19 2968970 2968990 RREB1 JASPAR yes 112105195
chr19 2968972 2968992 RREB1 JASPAR yes 112105196
chr19 2968977 2968992 FOXP1 JASPAR yes 112105197
chr19 2968977 2968997 RREB1 JASPAR yes 112105198
chr19 2968977 2968998 IRF1 JASPAR yes 112105199
chr19 2968980 2969537 ZNF274 GTRD no Cervix (HeLa-S3) 21838369
chr19 2968984 2968990 TCF4 TRANSFAC yes 112105200
chr19 2968984 2968999 FOXP1 JASPAR yes 112105201
chr19 2968985 2968996 FOXP2 JASPAR yes 112105202
chr19 2968985 2968997 FOXC2 JASPAR yes 112105203
Genes associated with rs552017238[chr19:2968985], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More