EnhancerDB
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  3. rs552022790[chr2:224642826]
Enhancers that have rs552022790[chr2:224642826]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224641685 224672795 enh6172
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs552022790[chr2:224642826]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224642812 224642833 IRF1 JASPAR yes 81285447
chr2 224642814 224642829 STAT2 JASPAR yes 81285448
chr2 224642816 224642836 RREB1 JASPAR yes 81285449
chr2 224642816 224642837 IRF1 JASPAR yes 81285450
chr2 224642817 224642838 IRF1 JASPAR yes 81285451
chr2 224642818 224642833 FOXP1 JASPAR yes 81285452
chr2 224642820 224642840 RREB1 JASPAR yes 81285453
chr2 224642823 224642829 TCF4 TRANSFAC yes 81285454
chr2 224642823 224642838 FOXP1 JASPAR yes 81285455
chr2 224642824 224642835 FOXP2 JASPAR yes 81285456
chr2 224642824 224642836 FOXC2 JASPAR yes 81285457
chr2 224642824 224642844 RREB1 JASPAR yes 81285458
chr2 224642825 224642845 RREB1 JASPAR yes 81285459
Genes associated with rs552022790[chr2:224642826], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More