EnhancerDB
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  3. rs552053653[chr14:100013549]
Enhancers that have rs552053653[chr14:100013549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 99982692 100045122 enh3448
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552053653[chr14:100013549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 100009301 100013559 ZNF143 GTRD no Epithelial (MCF-7) 21637931
chr14 100009301 100013559 ZNF143 GTRD no Epithelial (MCF-7) 108122272
chr14 100009622 100013846 ZNF143 GTRD no Epithelial (MCF-7) 21637932
chr14 100009622 100013846 ZNF143 GTRD no Epithelial (MCF-7) 108122273
chr14 100009811 100013746 ZNF143 GTRD no Epithelial (MCF-7) 21637933
chr14 100009811 100013746 ZNF143 GTRD no Epithelial (MCF-7) 108122274
chr14 100009983 100014024 ZNF143 GTRD no Epithelial (MCF-7) 21637935
chr14 100009983 100014024 ZNF143 GTRD no Epithelial (MCF-7) 108122276
chr14 100011151 100013895 ZNF143 GTRD no Epithelial (MCF-7) 21637945
chr14 100011151 100013895 ZNF143 GTRD no Epithelial (MCF-7) 108122287
chr14 100011492 100013632 ZNF143 GTRD no Epithelial (MCF-7) 21637959
chr14 100011492 100013632 ZNF143 GTRD no Epithelial (MCF-7) 108122301
chr14 100011567 100013913 ZNF143 GTRD no Epithelial (MCF-7) 21637965
chr14 100011567 100013913 ZNF143 GTRD no Epithelial (MCF-7) 108122307
chr14 100011835 100014050 ZNF143 GTRD no Epithelial (MCF-7) 21637972
chr14 100011835 100014050 ZNF143 GTRD no Epithelial (MCF-7) 108122314
chr14 100011902 100013571 ZNF143 GTRD no Epithelial (MCF-7) 21637973
chr14 100011902 100013571 ZNF143 GTRD no Epithelial (MCF-7) 108122315
chr14 100012252 100013817 ZNF274 GTRD no Blood (GM12878) 108122328
chr14 100012462 100013651 ZNF274 GTRD no Blood (GM12878) 108122333
chr14 100013542 100013553 CDX2 JASPAR yes 117716925
chr14 100013543 100013554 HOXA10 JASPAR yes 117716926
chr14 100013544 100013553 CDX1 JASPAR yes 117716927
chr14 100013544 100013554 HOXA13 JASPAR yes 117716928
chr14 100013544 100013554 HOXB13 JASPAR yes 117716929
chr14 100013544 100013554 HOXD13 JASPAR yes 117716930
chr14 100013544 100013559 MEF2C JASPAR yes 117716931
chr14 100013545 100013560 MEF2A JASPAR yes 117716932
chr14 100013546 100013558 MEF2A JASPAR yes 117716933
chr14 100013546 100013558 MEF2B JASPAR yes 117716934
chr14 100013546 100013558 MEF2D JASPAR yes 117716935
chr14 100013547 100013557 MEF2A JASPAR yes 117716936
Genes associated with rs552053653[chr14:100013549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More