EnhancerDB
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  3. rs552059568[chr16:376957]
Enhancers that have rs552059568[chr16:376957]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs552059568[chr16:376957]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 375960 380365 ZNF143 GTRD no Epithelial (MCF-7) 21683846
chr16 375960 380365 ZNF143 GTRD no Epithelial (MCF-7) 108170225
chr16 376036 377701 ZNF143 GTRD no Epithelial (MCF-7) 21683847
chr16 376036 377701 ZNF143 GTRD no Epithelial (MCF-7) 108170226
chr16 376766 377557 TCF7L2 GTRD no Colon (HCT116) 21683848
chr16 376766 377557 TCF7L2 GTRD no Colon (HCT116) 108170227
chr16 376955 376968 NFKB1 JASPAR yes 9104975
chr16 376955 376968 NFKB2 JASPAR yes 9104976
Genes associated with rs552059568[chr16:376957], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More