EnhancerDB
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  3. rs552072401[chr19:3378259]
Enhancers that have rs552072401[chr19:3378259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552072401[chr19:3378259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3378256 3378271 FOXP1 JASPAR yes 112125455
chr19 3378257 3378272 FOXP1 JASPAR yes 112125456
chr19 3378258 3378273 FOXP1 JASPAR yes 112125457
chr19 3378258 3378279 IRF1 JASPAR yes 112125458
chr19 3378259 3378274 FOXP1 JASPAR yes 112125459
chr19 3378259 3378280 IRF1 JASPAR yes 112125460
Genes associated with rs552072401[chr19:3378259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More