EnhancerDB
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  3. rs552074539[chr16:85189243]
Enhancers that have rs552074539[chr16:85189243]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552074539[chr16:85189243]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85188588 85189795 ZNF143 GTRD no Epithelial (MCF-7) 21720428
chr16 85188621 85189435 ZNF143 GTRD no Epithelial (MCF-7) 21720429
chr16 85188666 85189421 ZNF143 GTRD no Epithelial (MCF-7) 21720430
chr16 85188674 85189701 ZNF274 GTRD no Liver (HepG2) 21720432
chr16 85188722 85189641 ZNF143 GTRD no Epithelial (MCF-7) 21720434
chr16 85188762 85189309 ZNF274 GTRD no Liver (HepG2) 21720436
chr16 85188784 85189407 ZNF274 GTRD no Liver (HepG2) 21720438
chr16 85188835 85189727 ZNF274 GTRD no Cervix (HeLa-S3) 21720441
chr16 85188854 85189648 ZNF143 GTRD no Epithelial (MCF-7) 21720443
chr16 85188887 85189327 ZNF274 GTRD no Cervix (HeLa-S3) 21720445
Genes associated with rs552074539[chr16:85189243], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More