EnhancerDB
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  3. rs552096199[chr17:76870120]
Enhancers that have rs552096199[chr17:76870120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76867725 76884335 enh17416
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552096199[chr17:76870120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76867085 76873854 ZBTB33 GTRD no Brain (SK-N-SH) 21795231
chr17 76867085 76873854 ZBTB33 GTRD no Brain (SK-N-SH) 108304128
chr17 76867339 76873992 TCF7L2 GTRD no Colon (HCT116) 21795232
chr17 76867339 76873992 TCF7L2 GTRD no Colon (HCT116) 108304129
chr17 76867349 76873907 TCF7L2 GTRD no Colon (HCT116) 21795233
chr17 76867349 76873907 TCF7L2 GTRD no Colon (HCT116) 108304130
chr17 76868772 76873927 ZBTB33 GTRD no Lung (A549) 108304131
chr17 76869898 76873942 ZBTB33 GTRD no Lung (A549) 108304132
chr17 76870107 76870127 TBX19 JASPAR yes 56184307
chr17 76870109 76870125 T JASPAR yes 56184308
chr17 76870116 76870126 TBX21 JASPAR yes 56184309
chr17 76870116 76870127 TBX2 JASPAR yes 56184310
chr17 76870116 76870129 EOMES JASPAR yes 56184311
chr17 76870117 76870125 TBX15 JASPAR yes 56184312
chr17 76870117 76870125 TBX4 JASPAR yes 56184313
chr17 76870117 76870130 SMAD2 JASPAR yes 56184314
Genes associated with rs552096199[chr17:76870120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More