EnhancerDB
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  3. rs552102832[chr1:202013852]
Enhancers that have rs552102832[chr1:202013852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs552102832[chr1:202013852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202008954 202021472 ZBTB33 GTRD no Lung (A549) 107857529
chr1 202009111 202020493 ZBTB33 GTRD no Lung (A549) 107857530
chr1 202011874 202014365 TCF7L2 GTRD no Colon (HCT116) 21365763
chr1 202011900 202013986 TCF7L2 GTRD no Colon (HCT116) 21365764
chr1 202012454 202014088 TCF7L2 GTRD no Colon (HCT116) 21365767
chr1 202012568 202014020 ZNF143 GTRD no Epithelial (MCF-7) 21365775
chr1 202012570 202013868 ZNF143 GTRD no Epithelial (MCF-7) 21365776
chr1 202012581 202013991 TCF7L2 GTRD no Colon (HCT116) 21365777
chr1 202013843 202013857 GLIS3 JASPAR yes 34545835
chr1 202013844 202013860 SRF JASPAR yes 34545836
Genes associated with rs552102832[chr1:202013852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More