EnhancerDB
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  3. rs552122344[chr1:22398584]
Enhancers that have rs552122344[chr1:22398584]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22389458 22399019 enh61811
Esophagus Peripheral Blood (MM.1S) Neural Stem Cells (H9) Stomach
Transcript factors that have rs552122344[chr1:22398584]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22398576 22398584 FOXC1 JASPAR yes 27345155
chr1 22398576 22398590 SPIC JASPAR yes 27345156
chr1 22398578 22398599 IRF1 JASPAR yes 27345157
chr1 22398579 22398600 IRF1 JASPAR yes 27345158
chr1 22398580 22398601 IRF1 JASPAR yes 27345159
chr1 22398581 22398602 IRF1 JASPAR yes 27345160
chr1 22398582 22398597 FOXP1 JASPAR yes 27345161
chr1 22398582 22398603 IRF1 JASPAR yes 27345162
chr1 22398583 22398598 FOXP1 JASPAR yes 27345163
chr1 22398583 22398604 IRF1 JASPAR yes 27345164
chr1 22398584 22398599 FOXP1 JASPAR yes 27345165
chr1 22398584 22398605 IRF1 JASPAR yes 27345166
Genes associated with rs552122344[chr1:22398584], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More