EnhancerDB
  1. Home
  2. SNP
  3. rs552130110[chr18:56226388]
Enhancers that have rs552130110[chr18:56226388]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56213245 56242835 enh4870
Astrocyte Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552130110[chr18:56226388]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56226377 56226390 DUXA JASPAR yes 110959126
chr18 56226378 56226389 DUX4 JASPAR yes 110959127
chr18 56226381 56226391 LHX6 JASPAR yes 110959128
chr18 56226386 56226402 GLIS1 JASPAR yes 110959129
Genes associated with rs552130110[chr18:56226388], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More