EnhancerDB
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  3. rs552143738[chr17:79390259]
Enhancers that have rs552143738[chr17:79390259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79375645 79405275 enh17444
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552143738[chr17:79390259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79390253 79390273 RREB1 JASPAR yes 56325599
chr17 79390255 79390275 RREB1 JASPAR yes 56325600
chr17 79390257 79390277 RREB1 JASPAR yes 56325601
chr17 79390259 79390279 RREB1 JASPAR yes 56325602
Genes associated with rs552143738[chr17:79390259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More