EnhancerDB
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  3. rs552161646[chr1:9850247]
Enhancers that have rs552161646[chr1:9850247]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9840492 9854775 enh53
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs552161646[chr1:9850247]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9850229 9850250 IRF1 JASPAR yes 26678662
chr1 9850233 9850247 STAT1 JASPAR yes 26678665
chr1 9850233 9850248 PRDM1 JASPAR yes 26678666
chr1 9850233 9850248 STAT2 JASPAR yes 26678667
chr1 9850233 9850251 IRF2 JASPAR yes 26678668
chr1 9850246 9850260 GATA2 JASPAR yes 26678671
Genes associated with rs552161646[chr1:9850247], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More