EnhancerDB
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  3. rs552172039[chr1:17874301]
Enhancers that have rs552172039[chr1:17874301]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17869605 17883659 enh26559
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs552172039[chr1:17874301]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17873633 17875473 ZBTB33 GTRD no Brain (SK-N-SH) 21325262
chr1 17873633 17875473 ZBTB33 GTRD no Brain (SK-N-SH) 107802266
chr1 17874287 17874306 CTCF JASPAR yes 27100025
Genes associated with rs552172039[chr1:17874301], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More