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- rs552200542[chr17:49509246]
Enhancers that have rs552200542[chr17:49509246]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
49502285 |
49519023 |
enh48044 |
|
|
Transcript factors that have rs552200542[chr17:49509246]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
49505268
|
49510036
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108272214
|
|
|
chr17
|
49505275
|
49510026
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108272215
|
|
|
chr17
|
49507258
|
49509859
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21772159
|
|
|
chr17
|
49507651
|
49509328
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21772160
|
|
|
chr17
|
49507721
|
49510036
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21772163
|
|
|
chr17
|
49507758
|
49510020
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21772164
|
|
|
chr17
|
49508082
|
49509868
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21772167
|
|
|
chr17
|
49509031
|
49509626
|
P63
|
GTRD
|
no
|
Skin (Keratinocyte)
|
21772171
|
|
|
chr17
|
49509237
|
49509253
|
SRF
|
JASPAR
|
yes
|
|
54765983
|
|
|
chr17
|
49509240
|
49509252
|
SRF
|
JASPAR
|
yes
|
|
54765984
|
|
Genes associated with rs552200542[chr17:49509246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |