EnhancerDB
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  3. rs552204087[chr19:12894919]
Enhancers that have rs552204087[chr19:12894919]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 12880762 12907555 enh5013
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Uterus Blood (T-cell)
chr19 12894545 12895330 vista28654
VISTA
Transcript factors that have rs552204087[chr19:12894919]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 12894582 12895245 EP300 UCSC Txn Factor no Conserved 108386318
chr19 12894596 12894966 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849883
chr19 12894596 12894966 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386320
chr19 12894629 12895052 NR3C1 UCSC Txn Factor no Conserved 108386321
chr19 12894651 12895245 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386323
chr19 12894689 12895153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849884
chr19 12894689 12895153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386324
chr19 12894732 12895218 TCF12 UCSC Txn Factor no Conserved 108386325
chr19 12894732 12895218 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386326
chr19 12894735 12894979 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386327
chr19 12894856 12895136 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386328
chr19 12894856 12895156 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108386329
chr19 12894872 12895127 FOXA1 UCSC Txn Factor no Conserved 108386330
chr19 12894904 12895127 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108386331
chr19 12894909 12895129 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108386332
chr19 12894914 12895570 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386333
chr19 12894914 12895570 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386334
chr19 12894919 12894934 AR JASPAR yes 70806051
chr19 12894919 12894934 AR JASPAR yes 112493710
Genes associated with rs552204087[chr19:12894919], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More