EnhancerDB
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  3. rs552213730[chr19:934100]
Enhancers that have rs552213730[chr19:934100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 927725 963215 enh4948
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs552213730[chr19:934100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 931796 935444 TCF7L2 GTRD no Colon (HCT116) 21830520
chr19 931796 935444 TCF7L2 GTRD no Colon (HCT116) 108348142
chr19 931796 935444 TCF7L2 GTRD no Colon (HCT116) 108348143
chr19 931815 935505 TCF7L2 GTRD no Colon (HCT116) 21830521
chr19 931815 935505 TCF7L2 GTRD no Colon (HCT116) 108348144
chr19 931815 935505 TCF7L2 GTRD no Colon (HCT116) 108348145
chr19 931890 935320 TCF7L2 GTRD no Colon (HCT116) 21830524
chr19 931890 935320 TCF7L2 GTRD no Colon (HCT116) 108348148
chr19 931890 935320 TCF7L2 GTRD no Colon (HCT116) 108348149
chr19 931895 934582 TCF7L2 GTRD no Colon (HCT116) 21830525
chr19 931895 934582 TCF7L2 GTRD no Colon (HCT116) 108348150
chr19 931970 934178 ZNF274 GTRD no Blood (GM12878) 21830527
chr19 931970 934178 ZNF274 GTRD no Blood (GM12878) 108348152
chr19 931987 935470 TCF7L2 GTRD no Colon (HCT116) 21830528
chr19 931987 935470 TCF7L2 GTRD no Colon (HCT116) 108348153
chr19 931987 935470 TCF7L2 GTRD no Colon (HCT116) 108348154
chr19 934048 935652 ZNF143 GTRD no Epithelial (MCF-7) 21830609
chr19 934048 935652 ZNF143 GTRD no Epithelial (MCF-7) 108348247
chr19 934095 935436 ZNF274 GTRD no Liver (HepG2) 21830610
chr19 934095 935436 ZNF274 GTRD no Liver (HepG2) 108348248
chr19 934096 934107 YY2 JASPAR yes 111983736
chr19 934100 934106 YY1 JASPAR yes 111983737
Genes associated with rs552213730[chr19:934100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More