EnhancerDB
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  3. rs552250629[chr3:12220874]
Enhancers that have rs552250629[chr3:12220874]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 12214625 12224015 enh35191
Prostate (PC-3) Cervix (HeLa-S3) Ovary Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Thyroid Lung (PC-9) Heart
chr3 12220728 12221239 vista39975
VISTA
Transcript factors that have rs552250629[chr3:12220874]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 12220858 12220879 IRF1 JASPAR yes 462142
chr3 12220858 12220879 IRF1 JASPAR yes 70937963
chr3 12220862 12220876 STAT1 JASPAR yes 462145
chr3 12220862 12220876 STAT1 JASPAR yes 70937966
chr3 12220862 12220877 STAT2 JASPAR yes 462146
chr3 12220862 12220877 STAT2 JASPAR yes 70937967
chr3 12220864 12220885 IRF1 JASPAR yes 462147
chr3 12220864 12220885 IRF1 JASPAR yes 70937968
chr3 12220868 12220883 FOXP1 JASPAR yes 462148
chr3 12220868 12220883 FOXP1 JASPAR yes 70937969
chr3 12220868 12220889 IRF1 JASPAR yes 462149
chr3 12220868 12220889 IRF1 JASPAR yes 70937970
chr3 12220869 12220884 FOXP1 JASPAR yes 462150
chr3 12220869 12220884 FOXP1 JASPAR yes 70937971
chr3 12220869 12220890 IRF1 JASPAR yes 462151
chr3 12220869 12220890 IRF1 JASPAR yes 70937972
chr3 12220870 12220885 FOXP1 JASPAR yes 462152
chr3 12220870 12220885 FOXP1 JASPAR yes 70937973
chr3 12220870 12220891 IRF1 JASPAR yes 462153
chr3 12220870 12220891 IRF1 JASPAR yes 70937974
chr3 12220871 12220886 FOXP1 JASPAR yes 462154
chr3 12220871 12220886 FOXP1 JASPAR yes 70937975
chr3 12220871 12220892 IRF1 JASPAR yes 462155
chr3 12220871 12220892 IRF1 JASPAR yes 70937976
chr3 12220872 12220887 FOXP1 JASPAR yes 462156
chr3 12220872 12220887 FOXP1 JASPAR yes 70937977
chr3 12220872 12220893 IRF1 JASPAR yes 462157
chr3 12220872 12220893 IRF1 JASPAR yes 70937978
chr3 12220873 12220888 FOXP1 JASPAR yes 462158
chr3 12220873 12220888 FOXP1 JASPAR yes 70937979
chr3 12220873 12220894 IRF1 JASPAR yes 462159
chr3 12220873 12220894 IRF1 JASPAR yes 70937980
chr3 12220874 12220889 FOXP1 JASPAR yes 462160
chr3 12220874 12220889 FOXP1 JASPAR yes 70937981
chr3 12220874 12220895 IRF1 JASPAR yes 462161
chr3 12220874 12220895 IRF1 JASPAR yes 70937982
Genes associated with rs552250629[chr3:12220874], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More