EnhancerDB
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  3. rs552270652[chr2:204433940]
Enhancers that have rs552270652[chr2:204433940]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204433605 204453715 enh6121
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung
Transcript factors that have rs552270652[chr2:204433940]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204433934 204433949 FOXP1 JASPAR yes 80240035
chr2 204433935 204433950 FOXP1 JASPAR yes 80240036
chr2 204433936 204433942 TBP TRANSFAC yes 80240037
chr2 204433936 204433951 FOXP1 JASPAR yes 80240038
chr2 204433936 204433957 IRF1 JASPAR yes 80240039
chr2 204433937 204433952 FOXP1 JASPAR yes 80240040
chr2 204433939 204433954 FOXP1 JASPAR yes 80240041
Genes associated with rs552270652[chr2:204433940], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More