EnhancerDB
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  3. rs552287514[chr17:76948454]
Enhancers that have rs552287514[chr17:76948454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76939164 76975154 enh17420
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs552287514[chr17:76948454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76945921 76950302 TCF7L2 GTRD no Colon (HCT116) 21795495
chr17 76946008 76950730 TCF7L2 GTRD no Colon (HCT116) 21795498
chr17 76948354 76949298 TCF7L2 GTRD no Colon (HCT116) 21795508
chr17 76948417 76950750 TCF7L2 GTRD no Colon (HCT116) 21795509
chr17 76948438 76948455 BCL6B JASPAR yes 56192772
chr17 76948444 76948457 NFKB1 JASPAR yes 56192773
chr17 76948446 76948456 NFKB1 JASPAR yes 56192774
chr17 76948446 76948457 NFKB1 JASPAR yes 56192775
chr17 76948451 76948464 TFAP2A JASPAR yes 56192776
chr17 76948451 76948464 TFAP2B JASPAR yes 56192777
chr17 76948451 76948464 TFAP2C JASPAR yes 56192778
chr17 76948452 76948458 SP1 TRANSFAC yes 56192779
Genes associated with rs552287514[chr17:76948454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More