EnhancerDB
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  3. rs552293193[chr15:99993388]
Enhancers that have rs552293193[chr15:99993388]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99971645 99998102 enh16467
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr15 99992993 99993428 vista21424
VISTA
Transcript factors that have rs552293193[chr15:99993388]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99992990 99993586 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108168413
chr15 99993046 99993482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108168414
chr15 99993155 99993475 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108168419
chr15 99993158 99993491 RUNX3 UCSC Txn Factor no Conserved 108168420
chr15 99993158 99993491 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108168421
chr15 99993164 99993468 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108168422
chr15 99993175 99993435 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108168423
chr15 99993199 99993463 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108168424
chr15 99993207 99993517 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108168425
chr15 99993382 99993397 FOXP1 JASPAR yes 25875663
chr15 99993382 99993397 FOXP1 JASPAR yes 70594519
chr15 99993385 99993396 FOXP2 JASPAR yes 25875664
chr15 99993385 99993396 FOXP2 JASPAR yes 70594520
Genes associated with rs552293193[chr15:99993388], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More