EnhancerDB
  1. Home
  2. SNP
  3. rs552296430[chr4:2479973]
Enhancers that have rs552296430[chr4:2479973]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 2475505 2490855 enh7849
Liver (HepG2) Large Intestine Blood (T-cell) Liver Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs552296430[chr4:2479973]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 2479962 2479973 HOXC13 JASPAR yes 87858145
chr4 2479963 2479975 SRF JASPAR yes 87858146
chr4 2479969 2479988 PAX5 JASPAR yes 87858148
chr4 2479971 2479976 ETS2 TRANSFAC yes 87858149
Genes associated with rs552296430[chr4:2479973], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More