EnhancerDB
  1. Home
  2. SNP
  3. rs552307665[chr17:41678230]
Enhancers that have rs552307665[chr17:41678230]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41660060 41681235 enh17172
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung Stomach Muscle (A673) Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs552307665[chr17:41678230]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41677462 41679974 ZNF274 GTRD no Cervix (HeLa-S3) 21761163
chr17 41677781 41678257 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21761164
chr17 41678185 41678949 ZNF274 GTRD no Cervix (HeLa-S3) 21761165
chr17 41678202 41679176 ZNF274 GTRD no Liver (HepG2) 21761166
chr17 41678218 41678232 POU1F1 JASPAR yes 54359557
chr17 41678219 41678231 POU3F1 JASPAR yes 54359558
chr17 41678219 41678231 POU3F2 JASPAR yes 54359559
chr17 41678219 41678232 POU2F2 JASPAR yes 54359560
chr17 41678225 41678246 IRF1 JASPAR yes 54359561
chr17 41678227 41678242 FOXP1 JASPAR yes 54359562
chr17 41678228 41678243 FOXP1 JASPAR yes 54359563
chr17 41678229 41678235 TBP TRANSFAC yes 54359564
chr17 41678229 41678244 FOXP1 JASPAR yes 54359565
chr17 41678230 41679517 ZNF274 GTRD no Liver (HepG2) 21761167
Genes associated with rs552307665[chr17:41678230], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More