EnhancerDB
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  3. rs552309397[chr1:23914033]
Enhancers that have rs552309397[chr1:23914033]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23909968 23931495 enh127
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs552309397[chr1:23914033]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23907496 23914124 ZNF274 GTRD no Blood (GM12878) 21325282
chr1 23907496 23914124 ZNF274 GTRD no Blood (GM12878) 107802428
chr1 23914024 23914038 TCF7L2 JASPAR yes 27443990
chr1 23914028 23914034 TCF1 TRANSFAC yes 27443991
Genes associated with rs552309397[chr1:23914033], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More