EnhancerDB
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  3. rs552324234[chr1:205446597]
Enhancers that have rs552324234[chr1:205446597]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205444631 205456855 enh61954
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Stomach Muscle (A673) Colon (HCT116) Breast Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs552324234[chr1:205446597]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205446452 205446999 TCF7L2 GTRD no Colon (HCT116) 21371875
chr1 205446596 205446606 TBX21 JASPAR yes 34762754
chr1 205446597 205446605 MGA JASPAR yes 34762755
chr1 205446597 205446605 TBX15 JASPAR yes 34762756
chr1 205446597 205446605 TBX1 JASPAR yes 34762757
chr1 205446597 205446605 TBX4 JASPAR yes 34762758
chr1 205446597 205446605 TBX5 JASPAR yes 34762759
Genes associated with rs552324234[chr1:205446597], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More