EnhancerDB
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  3. rs552341611[chr1:154797840]
Enhancers that have rs552341611[chr1:154797840]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs552341611[chr1:154797840]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154797835 154797856 IRF1 JASPAR yes 32315058
chr1 154797836 154797857 IRF1 JASPAR yes 32315059
chr1 154797837 154797858 IRF1 JASPAR yes 32315060
chr1 154797838 154797842 YY1 TRANSFAC yes 32315061
chr1 154797838 154797853 FOXP1 JASPAR yes 32315062
chr1 154797838 154797859 IRF1 JASPAR yes 32315063
chr1 154797839 154797854 FOXP1 JASPAR yes 32315064
chr1 154797839 154797860 IRF1 JASPAR yes 32315065
chr1 154797840 154797855 FOXP1 JASPAR yes 32315066
Genes associated with rs552341611[chr1:154797840], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More