EnhancerDB
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  3. rs552344524[chr12:104255904]
Enhancers that have rs552344524[chr12:104255904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 104248960 104266595 enh14936
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs552344524[chr12:104255904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 104254733 104256765 ZBTB33 GTRD no Lung (A549) 21568836
chr12 104254746 104256097 ZBTB33 GTRD no Lung (A549) 21568837
chr12 104254764 104256791 ZBTB33 GTRD no Lung (A549) 21568838
chr12 104254798 104256068 ZNF143 GTRD no Epithelial (MCF-7) 21568839
chr12 104254813 104256097 ZNF143 GTRD no Epithelial (MCF-7) 21568840
chr12 104254819 104256281 ZNF143 GTRD no Epithelial (MCF-7) 21568841
chr12 104254844 104256587 ZBTB33 GTRD no Lung (A549) 21568842
chr12 104254854 104256550 ZNF274 GTRD no Cervix (HeLa-S3) 21568843
chr12 104254870 104256103 ZNF143 GTRD no Epithelial (MCF-7) 21568844
chr12 104254892 104256345 ZNF143 GTRD no Epithelial (MCF-7) 21568846
chr12 104254900 104256725 ZNF274 GTRD no Cervix (HeLa-S3) 21568847
chr12 104254937 104256785 ZBTB33 GTRD no Lung (A549) 21568849
chr12 104254965 104256167 ZBTB33 GTRD no Lung (A549) 21568851
chr12 104254975 104256496 ZNF274 GTRD no Cervix (HeLa-S3) 21568852
chr12 104254976 104256058 ZNF143 GTRD no Epithelial (MCF-7) 21568853
chr12 104254998 104256632 ZNF274 GTRD no Cervix (HeLa-S3) 21568855
chr12 104255002 104256452 ZNF274 GTRD no Cervix (HeLa-S3) 21568856
chr12 104255018 104256078 ZNF143 GTRD no Epithelial (MCF-7) 21568857
chr12 104255090 104256258 ZNF143 GTRD no Epithelial (MCF-7) 21568858
chr12 104255107 104256603 ZBTB33 GTRD no Lung (A549) 21568859
chr12 104255124 104256956 ZBTB33 GTRD no Lung (A549) 21568860
chr12 104255132 104255906 ZNF143 GTRD no Epithelial (MCF-7) 21568862
chr12 104255143 104256060 ZBTB33 GTRD no Lung (A549) 21568863
chr12 104255164 104256219 ZNF143 GTRD no Epithelial (MCF-7) 21568865
chr12 104255170 104256082 ZNF143 GTRD no Epithelial (MCF-7) 21568866
chr12 104255293 104256027 ZNF143 GTRD no Epithelial (MCF-7) 21568872
chr12 104255370 104256106 ZNF143 GTRD no Epithelial (MCF-7) 21568880
chr12 104255386 104256163 ZBTB33 GTRD no Lung (A549) 21568882
chr12 104255444 104255926 ZNF143 GTRD no Epithelial (MCF-7) 21568885
chr12 104255653 104256174 ZNF143 GTRD no Epithelial (MCF-7) 21568886
chr12 104255697 104256060 ZNF143 GTRD no Epithelial (MCF-7) 21568887
chr12 104255883 104255904 IRF1 JASPAR yes 123343381
Genes associated with rs552344524[chr12:104255904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More