EnhancerDB
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  3. rs552397541[chr11:61742426]
Enhancers that have rs552397541[chr11:61742426]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 61737318 61755910 enh50853
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Ovary Stomach Thyroid Lung (PC-9) Pancreas Uterus Heart
Transcript factors that have rs552397541[chr11:61742426]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 61741973 61743013 ZNF143 GTRD no Epithelial (MCF-7) 21487223
chr11 61741973 61743013 ZNF143 GTRD no Epithelial (MCF-7) 107973373
chr11 61742011 61743060 ZNF143 GTRD no Epithelial (MCF-7) 21487224
chr11 61742011 61743060 ZNF143 GTRD no Epithelial (MCF-7) 107973374
chr11 61742029 61742924 ZNF143 GTRD no Epithelial (MCF-7) 21487225
chr11 61742029 61742924 ZNF143 GTRD no Epithelial (MCF-7) 107973375
chr11 61742053 61742917 ZNF143 GTRD no Epithelial (MCF-7) 21487226
chr11 61742053 61742917 ZNF143 GTRD no Epithelial (MCF-7) 107973376
chr11 61742076 61743078 ZNF143 GTRD no Epithelial (MCF-7) 21487227
chr11 61742076 61743078 ZNF143 GTRD no Epithelial (MCF-7) 107973377
chr11 61742087 61742739 MYOD GTRD no Muscle (Myoblast) 107973378
chr11 61742099 61742952 ZNF274 GTRD no Bone Marrow (K562) 107973379
chr11 61742106 61742958 ZNF274 GTRD no Bone Marrow (K562) 107973380
chr11 61742209 61742945 ZNF143 GTRD no Epithelial (MCF-7) 21487228
chr11 61742209 61742945 ZNF143 GTRD no Epithelial (MCF-7) 107973381
chr11 61742246 61742911 ZNF143 GTRD no Epithelial (MCF-7) 21487229
chr11 61742246 61742911 ZNF143 GTRD no Epithelial (MCF-7) 107973382
chr11 61742270 61742772 ZNF274 GTRD no Bone Marrow (K562) 107973383
chr11 61742276 61743217 ZNF143 GTRD no Epithelial (MCF-7) 21487230
chr11 61742276 61743217 ZNF143 GTRD no Epithelial (MCF-7) 107973384
chr11 61742295 61742992 ZNF143 GTRD no Epithelial (MCF-7) 21487231
chr11 61742295 61742992 ZNF143 GTRD no Epithelial (MCF-7) 107973385
chr11 61742342 61743067 TCF7L2 GTRD no Colon (HCT116) 107973386
chr11 61742347 61742926 ZNF274 GTRD no Bone Marrow (K562) 107973387
chr11 61742363 61742999 ZNF143 GTRD no Epithelial (MCF-7) 21487232
chr11 61742363 61742999 ZNF143 GTRD no Epithelial (MCF-7) 107973388
chr11 61742376 61743112 ZNF143 GTRD no Epithelial (MCF-7) 21487233
chr11 61742376 61743112 ZNF143 GTRD no Epithelial (MCF-7) 107973389
chr11 61742400 61742727 ZNF274 GTRD no Blood (GM12878) 107973390
chr11 61742413 61742428 FOXP1 JASPAR yes 39174539
chr11 61742414 61742435 IRF1 JASPAR yes 39174541
chr11 61742415 61742427 FOXC2 JASPAR yes 39174542
chr11 61742417 61742432 FOXP1 JASPAR yes 39174543
chr11 61742420 61742441 IRF1 JASPAR yes 39174544
chr11 61742423 61742429 TBP TRANSFAC yes 39174545
chr11 61742425 61742446 IRF1 JASPAR yes 39174546
Genes associated with rs552397541[chr11:61742426], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More