EnhancerDB
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Enhancers that have rs552440914[chr19:3405600]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3395005 3410358 enh17863
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs552440914[chr19:3405600]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3403375 3405612 TCF7L2 GTRD no Colon (HCT116) 21839355
chr19 3403375 3405612 TCF7L2 GTRD no Colon (HCT116) 108366702
chr19 3403375 3405612 TCF7L2 GTRD no Colon (HCT116) 108366703
chr19 3403375 3405612 TCF7L2 GTRD no Colon (HCT116) 108366704
chr19 3404073 3405649 TCF7L2 GTRD no Colon (HCT116) 21839373
chr19 3404073 3405649 TCF7L2 GTRD no Colon (HCT116) 108366749
chr19 3404073 3405649 TCF7L2 GTRD no Colon (HCT116) 108366750
chr19 3404073 3405649 TCF7L2 GTRD no Colon (HCT116) 108366751
chr19 3405588 3405600 FOXI1 JASPAR yes 112129037
chr19 3405588 3405602 POU4F1 JASPAR yes 112129038
chr19 3405588 3405603 FOXP1 JASPAR yes 112129039
chr19 3405588 3405603 HNF1A JASPAR yes 112129040
chr19 3405589 3405601 FOXC2 JASPAR yes 112129041
chr19 3405589 3405603 ONECUT2 JASPAR yes 112129042
chr19 3405589 3405603 ONECUT3 JASPAR yes 112129043
chr19 3405590 3405601 FOXB1 JASPAR yes 112129044
chr19 3405590 3405601 FOXC1 JASPAR yes 112129045
chr19 3405590 3405601 PROP1 JASPAR yes 112129046
chr19 3405590 3405606 POU4F2 JASPAR yes 112129047
chr19 3405590 3405606 POU4F3 JASPAR yes 112129048
chr19 3405591 3405606 FOXA1 JASPAR yes 112129050
chr19 3405592 3405604 FOXI1 JASPAR yes 112129051
chr19 3405592 3405606 POU4F1 JASPAR yes 112129052
chr19 3405592 3405607 FOXP1 JASPAR yes 112129053
chr19 3405592 3405607 HNF1A JASPAR yes 112129054
chr19 3405593 3405605 FOXC2 JASPAR yes 112129055
chr19 3405593 3405607 ONECUT2 JASPAR yes 112129056
chr19 3405593 3405607 ONECUT3 JASPAR yes 112129057
chr19 3405594 3405605 FOXB1 JASPAR yes 112129058
chr19 3405594 3405605 FOXC1 JASPAR yes 112129059
chr19 3405594 3405605 PROP1 JASPAR yes 112129060
chr19 3405594 3405610 POU4F2 JASPAR yes 112129061
chr19 3405594 3405610 POU4F3 JASPAR yes 112129062
chr19 3405595 3405610 FOXA1 JASPAR yes 112129064
chr19 3405596 3405608 FOXI1 JASPAR yes 112129065
chr19 3405596 3405610 POU4F1 JASPAR yes 112129066
chr19 3405596 3405611 FOXP1 JASPAR yes 112129067
chr19 3405596 3405611 HNF1A JASPAR yes 112129068
chr19 3405597 3405609 FOXC2 JASPAR yes 112129069
chr19 3405597 3405611 ONECUT2 JASPAR yes 112129070
chr19 3405597 3405611 ONECUT3 JASPAR yes 112129071
chr19 3405598 3405609 FOXB1 JASPAR yes 112129072
chr19 3405598 3405609 FOXC1 JASPAR yes 112129073
chr19 3405598 3405609 PROP1 JASPAR yes 112129074
chr19 3405599 3405603 YY1 TRANSFAC yes 112129075
chr19 3405599 3405614 FOXA1 JASPAR yes 112129076
chr19 3405600 3405612 FOXI1 JASPAR yes 112129077
chr19 3405600 3405615 FOXP1 JASPAR yes 112129078
Genes associated with rs552440914[chr19:3405600], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More