EnhancerDB
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  3. rs552469139[chr5:149702651]
Enhancers that have rs552469139[chr5:149702651]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149691605 149705895 enh22714
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Adrenal Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs552469139[chr5:149702651]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149702638 149702651 ZBTB18 JASPAR yes 66874381
chr5 149702640 149702652 TAL1 JASPAR yes 66874386
chr5 149702643 149702655 FOXI1 JASPAR yes 66874387
chr5 149702644 149702655 FOXP2 JASPAR yes 66874388
chr5 149702644 149702658 FOXF2 JASPAR yes 66874389
chr5 149702646 149702656 HOXA13 JASPAR yes 66874390
chr5 149702646 149702657 FOXH1 JASPAR yes 66874391
chr5 149702646 149702657 HOXA10 JASPAR yes 66874392
chr5 149702647 149702656 CDX1 JASPAR yes 66874393
Genes associated with rs552469139[chr5:149702651], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More