EnhancerDB
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  3. rs552484018[chr19:4582201]
Enhancers that have rs552484018[chr19:4582201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4562990 4590495 enh17872
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Spleen Uterus Stomach
Transcript factors that have rs552484018[chr19:4582201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4579392 4582305 TCF7L2 GTRD no Colon (HCT116) 21841667
chr19 4580040 4582276 TCF7L2 GTRD no Colon (HCT116) 21841669
chr19 4580047 4582399 TCF7L2 GTRD no Colon (HCT116) 21841671
chr19 4580080 4582414 TCF7L2 GTRD no Colon (HCT116) 21841674
chr19 4580087 4582761 ZNF274 GTRD no Liver (HepG2) 21841675
chr19 4580094 4582297 TCF7L2 GTRD no Colon (HCT116) 21841676
chr19 4580142 4582551 TCF7L2 GTRD no Colon (HCT116) 21841678
chr19 4580152 4582320 TCF7L2 GTRD no Colon (HCT116) 21841680
chr19 4580164 4582596 ZNF274 GTRD no Liver (HepG2) 21841682
chr19 4580266 4582605 ZNF274 GTRD no Liver (HepG2) 21841691
chr19 4581085 4582212 TCF7L2 GTRD no Colon (HCT116) 21841708
chr19 4581161 4582351 TCF7L2 GTRD no Colon (HCT116) 21841709
chr19 4581234 4582571 ZNF274 GTRD no Liver (HepG2) 21841711
chr19 4581344 4582753 ZNF274 GTRD no Liver (HepG2) 21841713
chr19 4581454 4582695 ZNF274 GTRD no Liver (HepG2) 21841714
chr19 4581544 4582803 ZNF274 GTRD no Liver (HepG2) 21841715
chr19 4581602 4582805 ZNF274 GTRD no Liver (HepG2) 21841719
chr19 4581605 4582707 ZNF274 GTRD no Liver (HepG2) 21841720
chr19 4581632 4582346 ZNF274 GTRD no Liver (HepG2) 21841721
chr19 4581678 4582691 ZNF274 GTRD no Liver (HepG2) 21841725
chr19 4581696 4582804 ZNF274 GTRD no Liver (HepG2) 21841727
chr19 4581701 4582708 ZNF274 GTRD no Liver (HepG2) 21841729
chr19 4581708 4582218 ZNF274 GTRD no Liver (HepG2) 21841733
chr19 4581719 4582708 ZNF274 GTRD no Liver (HepG2) 21841735
chr19 4581731 4582789 ZNF274 GTRD no Liver (HepG2) 21841737
chr19 4581767 4582671 ZNF274 GTRD no Liver (HepG2) 21841741
chr19 4581859 4583841 TCF7L2 GTRD no Colon (HCT116) 21841742
chr19 4581916 4584209 TCF7L2 GTRD no Colon (HCT116) 21841743
chr19 4582174 4582455 ZNF274 GTRD no Liver (HepG2) 21841744
chr19 4582178 4582761 ZNF274 GTRD no Liver (HepG2) 21841745
chr19 4582194 4582204 RORA JASPAR yes 112176018
chr19 4582195 4582206 ESRRA JASPAR yes 112176019
chr19 4582195 4582206 ESRRB JASPAR yes 112176020
chr19 4582195 4582208 NR2F1 JASPAR yes 112176021
chr19 4582197 4582205 NR4A2 JASPAR yes 112176022
chr19 4582197 4582773 ZNF274 GTRD no Liver (HepG2) 21841746
chr19 4582199 4582203 ESR1 TRANSFAC yes 112176023
Genes associated with rs552484018[chr19:4582201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More