EnhancerDB
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  3. rs552498453[chr17:27470269]
Enhancers that have rs552498453[chr17:27470269]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27463605 27492255 enh4319
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552498453[chr17:27470269]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27470253 27470274 IRF1 JASPAR yes 53716786
chr17 27470258 27470273 FOXP1 JASPAR yes 53716787
chr17 27470260 27470280 RREB1 JASPAR yes 53716788
chr17 27470262 27470277 FOXP1 JASPAR yes 53716789
chr17 27470263 27470274 FOXA1 JASPAR yes 53716790
chr17 27470263 27470278 FOXA1 JASPAR yes 53716791
chr17 27470264 27470276 FOXC2 JASPAR yes 53716792
chr17 27470265 27470277 FOXI1 JASPAR yes 53716793
chr17 27470266 27470281 FOXP1 JASPAR yes 53716794
chr17 27470269 27470281 FOXI1 JASPAR yes 53716795
Genes associated with rs552498453[chr17:27470269], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More