EnhancerDB
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  3. rs552506473[chr1:9615329]
Enhancers that have rs552506473[chr1:9615329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9595905 9627275 enh49
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552506473[chr1:9615329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9615320 9615331 YY2 JASPAR yes 26661398
chr1 9615324 9615330 YY1 JASPAR yes 26661399
chr1 9615326 9615337 TBX20 JASPAR yes 26661400
chr1 9615327 9615337 TBX21 JASPAR yes 26661401
chr1 9615328 9615336 MGA JASPAR yes 26661402
chr1 9615328 9615336 TBX15 JASPAR yes 26661403
chr1 9615328 9615336 TBX1 JASPAR yes 26661404
chr1 9615328 9615336 TBX4 JASPAR yes 26661405
chr1 9615328 9615336 TBX5 JASPAR yes 26661406
Genes associated with rs552506473[chr1:9615329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More