EnhancerDB
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  3. rs552533581[chr1:40267116]
Enhancers that have rs552533581[chr1:40267116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40262423 40268473 enh11765
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Thymus Stomach
Transcript factors that have rs552533581[chr1:40267116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40267108 40267116 NR4A2 JASPAR yes 28291836
chr1 40267111 40267121 SREBF1 JASPAR yes 28291837
chr1 40267111 40267121 SREBF2 JASPAR yes 28291838
Genes associated with rs552533581[chr1:40267116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More