EnhancerDB
  1. Home
  2. SNP
  3. rs552542088[chr2:227032283]
Enhancers that have rs552542088[chr2:227032283]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227031385 227057435 enh34352
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas (Panc1) Uterus Stomach
Transcript factors that have rs552542088[chr2:227032283]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227032276 227032287 FOXP2 JASPAR yes 81432467
chr2 227032278 227032292 SPI1 JASPAR yes 81432468
chr2 227032278 227032292 SPIC JASPAR yes 81432469
Genes associated with rs552542088[chr2:227032283], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More