EnhancerDB
  1. Home
  2. SNP
  3. rs552542861[chr1:31949839]
Enhancers that have rs552542861[chr1:31949839]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31947645 31983179 enh198
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs552542861[chr1:31949839]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31949759 31950192 ZNF274 GTRD no Cervix (HeLa-S3) 107802732
chr1 31949833 31949843 NFKB1 JASPAR yes 27931389
Genes associated with rs552542861[chr1:31949839], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More