EnhancerDB
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  3. rs552548999[chr6:42009078]
Enhancers that have rs552548999[chr6:42009078]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42004605 42015829 enh9109
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552548999[chr6:42009078]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42009069 42009083 PLAG1 JASPAR yes 101689185
Genes associated with rs552548999[chr6:42009078], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More