EnhancerDB
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  3. rs552555872[chr12:109163592]
Enhancers that have rs552555872[chr12:109163592]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109156825 109170435 enh14976
Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Lung Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs552555872[chr12:109163592]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109163577 109163592 TFAP2A JASPAR yes 123620733
chr12 109163577 109163592 TFAP2C JASPAR yes 123620734
chr12 109163585 109163598 NFKB1 JASPAR yes 123620736
chr12 109163585 109163598 NFKB2 JASPAR yes 123620737
chr12 109163586 109163597 NFKB1 JASPAR yes 123620738
chr12 109163587 109163597 NFKB1 JASPAR yes 123620739
chr12 109163587 109163597 RELA JASPAR yes 123620740
Genes associated with rs552555872[chr12:109163592], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More