EnhancerDB
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  3. rs552557061[chr15:40352457]
Enhancers that have rs552557061[chr15:40352457]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40334765 40353183 enh16060
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552557061[chr15:40352457]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40352295 40353208 ZNF143 GTRD no Epithelial (MCF-7) 21649547
chr15 40352303 40352571 ZNF143 GTRD no Epithelial (MCF-7) 21649548
chr15 40352307 40352768 ZNF143 GTRD no Epithelial (MCF-7) 21649549
chr15 40352345 40353125 ZNF143 GTRD no Epithelial (MCF-7) 21649550
chr15 40352353 40353163 ZNF143 GTRD no Epithelial (MCF-7) 21649551
chr15 40352383 40353145 ZNF143 GTRD no Epithelial (MCF-7) 21649552
chr15 40352396 40353071 ZNF143 GTRD no Epithelial (MCF-7) 21649553
chr15 40352397 40353196 ZNF143 GTRD no Epithelial (MCF-7) 21649554
chr15 40352425 40353212 ZNF143 GTRD no Epithelial (MCF-7) 21649555
chr15 40352428 40352985 ZNF143 GTRD no Epithelial (MCF-7) 21649556
chr15 40352432 40352883 ZNF143 GTRD no Epithelial (MCF-7) 21649557
chr15 40352440 40352864 ZNF143 GTRD no Epithelial (MCF-7) 21649558
chr15 40352446 40352461 HSF1 JASPAR yes 22924712
chr15 40352457 40353143 ZNF143 GTRD no Epithelial (MCF-7) 21649559
Genes associated with rs552557061[chr15:40352457], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More