EnhancerDB
  1. Home
  2. SNP
  3. rs552570440[chr1:12196977]
Enhancers that have rs552570440[chr1:12196977]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12196945 12220680 enh11507
Prostate (PC-3) Large Intestine Ovary Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Uterus Thymus Heart
Transcript factors that have rs552570440[chr1:12196977]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12196965 12196979 ONECUT1 JASPAR yes 26801993
chr1 12196965 12196979 ONECUT2 JASPAR yes 26801994
chr1 12196965 12196979 ONECUT3 JASPAR yes 26801995
Genes associated with rs552570440[chr1:12196977], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More