EnhancerDB
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  3. rs552604987[chr1:28573423]
Enhancers that have rs552604987[chr1:28573423]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28563689 28580455 enh185
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs552604987[chr1:28573423]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28572560 28573772 TEF1 GTRD no Bone (Osteoblast) 107802656
chr1 28573410 28573424 IRF7 JASPAR yes 27753624
chr1 28573411 28573429 IRF2 JASPAR yes 27753625
chr1 28573412 28573424 IRF1 JASPAR yes 27753626
chr1 28573412 28573427 LEF1 JASPAR yes 27753627
Genes associated with rs552604987[chr1:28573423], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More