EnhancerDB
  1. Home
  2. SNP
  3. rs552620397[chr6:39233296]
Enhancers that have rs552620397[chr6:39233296]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 39227705 39251475 enh23217
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Liver Stomach Placenta Thyroid Lung (PC-9) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs552620397[chr6:39233296]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 39233291 39233306 RUNX2 JASPAR yes 101521891
chr6 39233292 39233312 RREB1 JASPAR yes 101521892
chr6 39233294 39233314 RREB1 JASPAR yes 101521893
Genes associated with rs552620397[chr6:39233296], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More