EnhancerDB
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  3. rs552624527[chr1:172887176]
Enhancers that have rs552624527[chr1:172887176]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 172887147 172887473 vista3926
VISTA
Transcript factors that have rs552624527[chr1:172887176]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172886836 172887516 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350458
chr1 172886836 172887516 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846259
chr1 172886970 172887446 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350459
chr1 172886970 172887446 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846260
chr1 172886982 172887528 ZBTB33 GTRD no Lung (A549) 21350460
chr1 172886982 172887528 ZBTB33 GTRD no Lung (A549) 107846261
chr1 172886989 172887565 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350461
chr1 172886989 172887565 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846262
chr1 172886992 172887532 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350462
chr1 172886992 172887532 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846263
chr1 172886992 172887786 ZBTB33 GTRD no Lung (A549) 21350463
chr1 172886992 172887786 ZBTB33 GTRD no Lung (A549) 107846264
chr1 172887002 172887486 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350464
chr1 172887002 172887486 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846265
chr1 172887011 172887495 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350465
chr1 172887011 172887495 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846266
chr1 172887016 172887400 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350466
chr1 172887016 172887400 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846267
chr1 172887078 172887408 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350467
chr1 172887078 172887408 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846268
chr1 172887078 172887701 ZNF274 GTRD no Bone Marrow (K562) 107846269
chr1 172887102 172887446 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350468
chr1 172887102 172887446 FOSL2 UCSC Txn Factor no Conserved 107846270
chr1 172887102 172887446 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846271
chr1 172887102 172887815 ZBTB33 GTRD no Lung (A549) 21350469
chr1 172887102 172887815 ZBTB33 GTRD no Lung (A549) 107846272
chr1 172887103 172887473 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350470
chr1 172887103 172887473 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846273
chr1 172887113 172887679 ZNF274 GTRD no Bone Marrow (K562) 107846274
chr1 172887122 172887518 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350471
chr1 172887122 172887518 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846275
chr1 172887123 172887373 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350472
chr1 172887123 172887373 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846276
chr1 172887128 172887584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350473
chr1 172887128 172887584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846277
chr1 172887130 172887440 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107846278
chr1 172887134 172887478 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350474
chr1 172887134 172887478 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846279
chr1 172887139 172887469 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350475
chr1 172887139 172887469 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846280
chr1 172887141 172887405 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350476
chr1 172887141 172887405 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846281
chr1 172887148 172887397 FOS UCSC Txn Factor no Conserved 107846282
chr1 172887148 172887404 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107846283
chr1 172887149 172887429 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107846284
chr1 172887157 172887395 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350477
chr1 172887157 172887395 JUND UCSC Txn Factor no Conserved 107846285
chr1 172887157 172887395 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846286
chr1 172887160 172887663 ZNF274 GTRD no Bone Marrow (K562) 107846287
chr1 172887163 172887556 ZBTB33 GTRD no Lung (A549) 21350478
chr1 172887163 172887556 ZBTB33 GTRD no Lung (A549) 107846288
chr1 172887164 172887540 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21350479
chr1 172887164 172887540 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107846289
chr1 172887168 172887184 NFYA JASPAR yes 33166181
chr1 172887168 172887184 NFYA JASPAR yes 118400643
chr1 172887170 172887373 JUN UCSC Txn Factor no Conserved 107846290
chr1 172887173 172887381 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350480
chr1 172887173 172887381 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846291
chr1 172887174 172887458 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350481
chr1 172887174 172887458 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846292
chr1 172887175 172887181 NFIC JASPAR yes 33166182
chr1 172887175 172887181 NFIC JASPAR yes 118400644
chr1 172887176 172887196 TP63 JASPAR yes 33166183
chr1 172887176 172887196 TP63 JASPAR yes 118400645
Genes associated with rs552624527[chr1:172887176], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More