EnhancerDB
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  3. rs552627338[chr1:212838859]
Enhancers that have rs552627338[chr1:212838859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212836474 212847396 enh12648
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Pancreas (Panc1) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs552627338[chr1:212838859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212838478 212838954 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21379029
chr1 212838537 212838993 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21379030
chr1 212838563 212838959 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21379031
chr1 212838590 212838926 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21379032
chr1 212838644 212838934 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21379033
chr1 212838653 212838868 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21379034
chr1 212838845 212838866 ZNF263 JASPAR yes 35145597
chr1 212838851 212838872 ZNF263 JASPAR yes 35145599
chr1 212838856 212838877 ZNF263 JASPAR yes 35145600
chr1 212838857 212838868 E2F6 JASPAR yes 35145601
chr1 212838857 212838878 ZNF263 JASPAR yes 35145602
Genes associated with rs552627338[chr1:212838859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More