EnhancerDB
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  3. rs552629899[chr17:76958880]
Enhancers that have rs552629899[chr17:76958880]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76939164 76975154 enh17420
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs552629899[chr17:76958880]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76957587 76959333 TCF7L2 GTRD no Colon (HCT116) 21795544
chr17 76958345 76959443 TCF7L2 GTRD no Colon (HCT116) 21795552
chr17 76958441 76958985 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21795563
chr17 76958554 76958884 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795582
chr17 76958567 76958937 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21795584
chr17 76958684 76958884 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21795590
chr17 76958879 76958886 JUN TRANSFAC yes 56194210
Genes associated with rs552629899[chr17:76958880], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More