EnhancerDB
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  3. rs552660688[chr16:1761770]
Enhancers that have rs552660688[chr16:1761770]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1759265 1774552 enh3842
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs552660688[chr16:1761770]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1761757 1761770 NFKB1 JASPAR yes 9157239
chr16 1761757 1761770 NFKB2 JASPAR yes 9157240
Genes associated with rs552660688[chr16:1761770], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More