EnhancerDB
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Enhancers that have rs552670808[chr12:110547538]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 110527065 110555975 enh2590
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs552670808[chr12:110547538]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 110545004 110547622 AR GTRD no Prostate (PC-3) 21572511
chr12 110545095 110547649 ZNF143 GTRD no Epithelial (MCF-7) 21572513
chr12 110546471 110547649 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21572578
chr12 110546509 110547655 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21572581
chr12 110547024 110547544 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21572617
chr12 110547025 110547641 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572618
chr12 110547088 110547624 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21572631
chr12 110547198 110547702 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21572648
chr12 110547239 110547555 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572649
chr12 110547280 110547664 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21572650
chr12 110547403 110547693 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21572651
chr12 110547410 110547686 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21572652
chr12 110547457 110547657 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21572653
chr12 110547527 110547538 USF1 JASPAR yes 123676935
chr12 110547527 110547538 USF2 JASPAR yes 123676936
chr12 110547528 110547538 TFEB JASPAR yes 123676937
chr12 110547528 110547538 TFEC JASPAR yes 123676938
Genes associated with rs552670808[chr12:110547538], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More